Neuroimaging

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{{logo_imaging_lab_nur_hirne.jpg|Neuroimaging Group}}

====== Practical course methods in functional imaging ======







==== Time and schedule ====

|Date and time: |Monday, 20__th__ through Friday, January 31__st__ 2020 |
|               |11:00 to 18:00, times may vary depending on availability of rooms and equipment |
|Schedule:      |Block course, 10 days \\ |



==== Registration ==== 
Everyone is invited to attend the talks.\\
Limited number of seats available for the practicals, please register by email to <neuroimaging@med.uni-muenchen.de>.

==== Summary ====  
An introduction to the theory and practice of functional and structural neuroimaging, with a combination of lectures, hands on experience with MRI, and data analysis methods including: functional magnetic resonance imaging (fMRI), morphometry and structural imaging including diffusion tensor imaging, simultaneous electroencephalography (EEG), and data analysis with e.g. SPM12. This is a unique opportunity to get to know the newest techniques in the field of neuroimaging, and learn about the type of research that is being done in this area in a number of different faculties around Munich.

A summary of the course, together with the course objectives and the time plan can be found here ({{ ::plan_ws1920.pdf |PDF}})
==== FAQ ====
^An upload link for the final projects has been added to the [[coursews1920:slides_ws1920 | restricted access section]].^

Read more about attendance, ECTS credits and missed hour/afternoons/weeks in our list of [[ImagingCourse_FAQ|frequently asked questions]].

==== Session titles ====

  * Please find the session titles in the time plan ({{ :schedule_ws1920.pdf |PDF}})
==== Locations  ====
  * Room D00.0027, [[http://www.uni-muenchen.de/funktionen/gebaeudeplaene/2971_d_00.pdf|D00.0027 Biozentrum]], Grosshadernerstr. 2, 82152 Martinsried (see Campus Martinsried Website [[http://www.biologie.uni-muenchen.de/anfahrt/index.html|here]])
  * MRI Scanners, Campus Grosshadern, Marchioninistr. 15, 81377 München

==== List of speakers  ====

  * Dr. Rainer Bögle, Neurology
  * PD Dr. Guido Böning, Nuclear Medicine
  * PD Dr. Olaf Dietrich, Clinical Radiology
  * Prof. Dr. Peter zu Eulenburg, DSGZ & Neuroradiology
  * Dr. Virginia Flanagin, DSGZ
  * Dr. Victor Spoormaker, MPI Psychiatry
  * Dr. Thomas Stephan, Neurology
  * PD Dr. Christian Vollmar, Neurology

 

==== Organizing Lab ====

Arbeitsgruppe fuer funktionelle, strukturelle und molekulare Bildgebung\\
Neurologie und DSGZ-LMU\\
Klinikum der Universität München – Großhadern\\
Fraunhoferstr. 20 \\
82152 Planegg/Martinsried \\
<neuroimaging@med.uni-muenchen.de>


===== Downloads =====

**[[coursews1920:slides_ws1920   | Restricted access - slides and project information]]** \\


==== Suggested Reading ====

[[http://www.fil.ion.ucl.ac.uk/spm/doc/books/hbf2|Human Brain Function, 2nd Edition]] -- PDF drafts of book chapters 

[[http://www.fil.ion.ucl.ac.uk/spm/doc/manual.pdf|SPM12 manual]]

[[http://www.humanbrainmapping.org/COBIDASreport|COBIDAS Report]] (The part on preprocessing starts around pg. 53)

[[http://www.healthcare.siemens.de/magnetic-resonance-imaging/magnetom-world/publications/mr-basics|Some Publications on MR Basics]]. Find the book //magnets, spins, and resonances// and other publications by Siemens for download on this webpage.

[[http://www.youtube.com/watch?v=snO68aJTOpM|Neuroanatomy lecture from Pinky and the Brain]]

==== MRI Tutorials ====

[[http://www.revisemri.com/|ReviseMRI.com]] -- Study material on MRI

[[http://www.cis.rit.edu/htbooks/mri|The basics of MRI]] -- introduction to MRI by Joseph P. Hornak

[[http://www.simplyphysics.com/MRIntro.html|Animated introduction to MRI]]


==== Software packages ====

[[http://www.fmrib.ox.ac.uk/fsl/|FSL]] -- a software package for functional neuroimaging

[[http://www.fil.ion.ucl.ac.uk/spm/|SPM]] -- a software package for functional neuroimaging

[[http://www.mccauslandcenter.sc.edu/crnl/tools|MRIcro/MRIcron]] -- a software tool for image viewing and conversion

[[http://www.mathworks.de/products/matlab/ |Matlab]] -- Commercial, programming language and environment for data analysis and computation