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ncp:ncpcourse1819

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NCP Course N: fMRI / WS201819

Time and schedule

Date and time: Mondays 10:15 a.m. (10:00 a.m. if you have questions
  • Part 1: MR physics (Virginia Flanagin)
  • Part 2: Experimental Design (Monica Emch)
  • Part 3: fMRI data analysis (Virginia Flanagin
  • Part 4: Tutorial for data analysis (Joshua Yudice)

Summary

An introduction to the theory and practice of functional and structural neuroimaging, with a combination of lectures, hands on experience with MRI, and data analysis methods including: functional magnetic resonance imaging (fMRI), morphometry and structural imaging including diffusion tensor imaging, simultaneous electroencephalography (EEG), and data analysis with e.g. SPM12. This is a unique opportunity to get to know the newest techniques in the field of neuroimaging, and learn about the type of research that is being done in this area in a number of different faculties around Munich.

Visit to the MRI machine

  • Please sign-up for your preferred time slots to visit the MRI machine here

Location

  • Room C11, Fifth Floor, Leopoldstraße 44

Organisers

  • Virginia L. Flanagin (virginia.flanagin@lmu.de)
  • Monica Emch (monica.emch@tum.de)
  • Joshua Yudice (joshua.yudice@lrz.uni-muenchen.de)

Downloads

Slides from the course (restricted access)

Online resources

MR basics and physics

Animated introduction to MRI – MRI animations
ReviseMRI.com – Additional material for studying MRI
The basics of MRI – A more detailed introduction to MRI MR Basics from Siemens. The book magnets, spins, and resonances and is a basic but solid reference for MR physics and image creation.

Analysis techniques

Human Brain Function, 2nd Edition – PDF drafts of book chapters
SPM12 manual – Manual to SPM

Reporting data

COBIDAS Report – Guidelines on how to write a paper that used fMRI

For fun

Software packages

SPM – a software package for functional neuroimaging
MRIcro/MRIcron – a software tool for image viewing and conversion
FSL – an alternative software package for functional neuroimaging (unix based)

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ncp/ncpcourse1819.1540218597.txt.gz · Last modified: by vflanagin